Organic Chemistry25 cards

Stereochemistry Flashcards

Develop a solid understanding of three-dimensional molecular structure in organic chemistry. These flashcards cover chirality, enantiomers, diastereomers, R/S configuration, meso compounds, optical activity, Fischer projections, and conformational analysis.

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What is a chiral center (stereocenter)?

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A tetrahedral atom (usually carbon) bonded to four different substituents. Its presence typically makes a molecule chiral, except in meso compounds.

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What are enantiomers?

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Non-superimposable mirror-image stereoisomers. They share all physical properties except the direction of optical rotation and behavior toward other chiral molecules.

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What are diastereomers?

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Stereoisomers that are not mirror images. They differ at one or more (but not all) stereocenters and have different physical properties.

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How do you assign R/S configuration?

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Assign CIP priorities (1-4) by atomic number. Orient priority 4 away from you. Trace 1-2-3: clockwise = R, counterclockwise = S.

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What is a meso compound?

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A molecule with multiple chiral centers that is achiral due to an internal plane of symmetry. It is optically inactive and superimposable on its mirror image.

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What is optical activity?

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The ability of a chiral substance to rotate plane-polarized light. Clockwise = dextrorotatory (+), counterclockwise = levorotatory (-). Direction cannot be predicted from R/S.

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How is specific rotation calculated?

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[a] = a / (l x c), where a = observed rotation (degrees), l = path length (dm), c = concentration (g/mL). Reported at 20 degrees C, 589 nm.

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What is a racemic mixture?

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A 1:1 mixture of enantiomers showing zero net optical rotation. Denoted (+-) or (d,l).

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How is enantiomeric excess (ee) calculated?

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ee = |%R - %S|, or equivalently |observed rotation / pure rotation| x 100%. 100% ee = pure enantiomer; 0% ee = racemate.

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What conventions define a Fischer projection?

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Horizontal bonds point toward the viewer (wedge), vertical bonds point away (dash). Most oxidized carbon at top. May rotate 180 degrees but not 90 degrees.

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How do you assign R/S from a Fischer projection?

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If priority 4 is on a vertical bond, read 1-2-3 directly (CW = R, CCW = S). If on a horizontal bond, read 1-2-3 and reverse the assignment.

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Does R/S configuration predict (+)/(-) rotation?

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No. R can be (+) or (-), and same for S. Optical rotation is an experimental property independent of the R/S label.

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What is the maximum number of stereoisomers for n chiral centers?

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2^n. Actual count may be lower if meso compounds exist.

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What are cis-trans (geometric) isomers?

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Diastereomers from restricted rotation (double bond or ring). Cis = same-side groups; trans = opposite-side groups. Complex cases use E/Z.

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How does E/Z nomenclature work?

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Apply CIP priorities to each double-bond carbon. Higher-priority groups on the same side = Z (zusammen); opposite sides = E (entgegen).

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What is an epimer?

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Diastereomers differing at only one of multiple stereocenters. Common in carbohydrate chemistry (e.g., glucose and galactose are C-4 epimers).

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What is the anomeric carbon?

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The carbon from the open-chain carbonyl that becomes a new stereocenter upon cyclization of a sugar. It generates alpha and beta anomers.

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How do conformational and configurational isomers differ?

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Conformational isomers interconvert by bond rotation and are generally not isolable. Configurational isomers (enantiomers, diastereomers) require bond breaking and are isolable.

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Why do bulky substituents prefer equatorial positions on cyclohexane?

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Equatorial placement avoids 1,3-diaxial interactions (steric strain with axial hydrogens on the same face), lowering the overall energy.

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What is a prochiral center?

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An sp3 carbon with two identical and two different substituents. Replacing one identical group creates a chiral center. Enzymes can distinguish the two identical groups.

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What is the Walden inversion?

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Complete inversion of configuration at a carbon during SN2. Backside attack by the nucleophile flips the remaining substituents, converting R to S or vice versa.

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What is retention of configuration?

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The product keeps the same spatial arrangement as the starting material. Occurs when the stereocenter is not involved in bond changes or via double inversion (e.g., neighboring group participation).

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What is a stereospecific reaction?

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A reaction where a specific stereoisomer of starting material gives a specific stereoisomeric product. Examples: SN2 (always inversion), E2 (anti-periplanar geometry).

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What is a stereoselective reaction?

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A reaction where one stereoisomeric product forms preferentially from a single starting material. Example: hydroboration-oxidation gives syn addition.

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What is atropisomerism?

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Stereoisomerism from restricted single-bond rotation with a high enough barrier to isolate the conformers. Classic example: biphenyls with bulky ortho substituents (axial chirality).

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Study Tips for Stereochemistry

1

Build or use 3D molecular models whenever possible—stereochemistry is fundamentally about spatial relationships that are easier to grasp in three dimensions than on paper.

2

Practice assigning R/S configurations repeatedly until the Cahn-Ingold-Prelog rules become second nature, including working from Fischer projections and Newman projections.

3

Create a relationship diagram for stereoisomer classifications: stereoisomers branch into enantiomers and diastereomers, and diastereomers include cis/trans isomers, epimers, and anomers.

4

When studying reactions, always consider the stereochemical outcome (inversion, retention, racemization, or formation of a specific diastereomer) alongside the product identity.

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